Reconstruct ancestral embeddings with `phytools::fastAnc`

Convenience wrapper around `phytools::fastAnc` that returns the full matrix of ancestral node estimates (one column per embedding dimension).

Usage

reconstruct_ancestral_ml_r(tree, tip_embeddings)

Arguments

tree

A `phylo` object.

tip_embeddings

Numeric matrix (`n_tips x D`).

Value

Numeric matrix (`n_nodes x D`). Row 1 is the root estimate.